Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox2P48432 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox2P48432 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox2P48432 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Gm45668-201ENSMUST00000211271 493 ntBASIC11.49□□□□□ -0.57
Sox2P48432 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.49□□□□□ -0.57
Sox2P48432 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox2P48432 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Gm24136-201ENSMUST00000083374 165 ntBASIC11.49□□□□□ -0.57
Sox2P48432 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Sox2P48432 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.49□□□□□ -0.57
Sox2P48432 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.49□□□□□ -0.57
Sox2P48432 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sox2P48432 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox2P48432 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox2P48432 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox2P48432 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gm12363-201ENSMUST00000122250 668 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm27701-201ENSMUST00000184498 110 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm28911-201ENSMUST00000188837 117 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm38092-201ENSMUST00000195600 653 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm37497-201ENSMUST00000195830 798 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm7287-201ENSMUST00000205267 602 ntBASIC11.48□□□□□ -0.57
Sox2P48432 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox2P48432 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.48□□□□□ -0.57
Sox2P48432 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Sox2P48432 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Sox2P48432 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox2P48432 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox2P48432 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sox2P48432 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms