Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm42599-201ENSMUST00000201308 469 ntBASIC11.11□□□□□ -0.63
Rfx3P48381 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfx3P48381 Gm40466-201ENSMUST00000212174 422 ntBASIC11.11□□□□□ -0.63
Rfx3P48381 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfx3P48381 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Rfx3P48381 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.11□□□□□ -0.63
Rfx3P48381 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfx3P48381 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfx3P48381 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.1□□□□□ -0.63
Rfx3P48381 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Gm13492-201ENSMUST00000119772 665 ntBASIC11.1□□□□□ -0.63
Rfx3P48381 Gm15703-201ENSMUST00000120250 880 ntBASIC11.1□□□□□ -0.63
Rfx3P48381 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rfx3P48381 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.1□□□□□ -0.63
Rfx3P48381 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.1□□□□□ -0.63
Rfx3P48381 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.1□□□□□ -0.63
Rfx3P48381 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfx3P48381 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfx3P48381 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Gm12384-201ENSMUST00000119228 919 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.09□□□□□ -0.63
Rfx3P48381 AY702102-202ENSMUST00000194651 1173 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Gm38092-201ENSMUST00000195600 653 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rfx3P48381 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms