Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm42599-201ENSMUST00000201308 469 ntBASIC11.9□□□□□ -0.5
TfamP40630 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.9□□□□□ -0.5
TfamP40630 Gm44882-201ENSMUST00000205702 802 ntBASIC11.9□□□□□ -0.5
TfamP40630 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.9□□□□□ -0.5
TfamP40630 Gm45925-201ENSMUST00000218882 744 ntBASIC11.9□□□□□ -0.5
TfamP40630 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TfamP40630 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TfamP40630 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TfamP40630 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
TfamP40630 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
TfamP40630 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TfamP40630 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Gm11424-201ENSMUST00000121929 829 ntBASIC11.89□□□□□ -0.51
TfamP40630 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.89□□□□□ -0.51
TfamP40630 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.89□□□□□ -0.51
TfamP40630 Gm7809-201ENSMUST00000153199 742 ntBASIC11.89□□□□□ -0.51
TfamP40630 Gm17150-201ENSMUST00000165577 381 ntBASIC11.89□□□□□ -0.51
TfamP40630 Gm8602-201ENSMUST00000184045 607 ntBASIC11.89□□□□□ -0.51
TfamP40630 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.89□□□□□ -0.51
TfamP40630 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.89□□□□□ -0.51
TfamP40630 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.89□□□□□ -0.51
TfamP40630 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.89□□□□□ -0.51
TfamP40630 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
TfamP40630 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TfamP40630 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.88□□□□□ -0.51
TfamP40630 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.88□□□□□ -0.51
TfamP40630 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TfamP40630 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TfamP40630 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.88□□□□□ -0.51
TfamP40630 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.88□□□□□ -0.51
TfamP40630 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.88□□□□□ -0.51
TfamP40630 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
TfamP40630 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.88□□□□□ -0.51
TfamP40630 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.88□□□□□ -0.51
TfamP40630 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
TfamP40630 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
TfamP40630 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TfamP40630 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TfamP40630 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
TfamP40630 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.88□□□□□ -0.51
TfamP40630 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TfamP40630 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms