Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm22323-201ENSMUST00000103832 109 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm14832-201ENSMUST00000121289 322 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm37259-201ENSMUST00000193903 849 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh4P39038 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Gm8712-201ENSMUST00000221090 701 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.78□□□□□ -0.52
Cdh4P39038 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdh4P39038 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh4P39038 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh4P39038 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Cdh4P39038 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cdh4P39038 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cdh4P39038 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cdh4P39038 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.77□□□□□ -0.52
Cdh4P39038 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh4P39038 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Gm24845-201ENSMUST00000158034 109 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm27046-201ENSMUST00000182160 463 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm42937-201ENSMUST00000197360 752 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm10312-201ENSMUST00000078515 489 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.77□□□□□ -0.53
Cdh4P39038 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cdh4P39038 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh4P39038 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdh4P39038 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdh4P39038 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh4P39038 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms