Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Rprl1-201ENSMUST00000158050 327 ntBASIC12.44□□□□□ -0.42
Slc6a13P31649 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a13P31649 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.44□□□□□ -0.42
Slc6a13P31649 Gzmn-202ENSMUST00000225535 989 ntBASIC12.44□□□□□ -0.42
Slc6a13P31649 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a13P31649 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.44□□□□□ -0.42
Slc6a13P31649 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a13P31649 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Slc6a13P31649 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm14109-201ENSMUST00000118814 309 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm17376-201ENSMUST00000166016 84 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.43□□□□□ -0.42
Slc6a13P31649 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.43□□□□□ -0.42
Slc6a13P31649 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a13P31649 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a13P31649 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Slc6a13P31649 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.42□□□□□ -0.42
Slc6a13P31649 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Slc6a13P31649 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Gm14644-201ENSMUST00000116671 647 ntBASIC12.42□□□□□ -0.42
Slc6a13P31649 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a13P31649 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.42□□□□□ -0.42
Slc6a13P31649 Gm14381-201ENSMUST00000122105 414 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms