Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Mmp3P28862 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Mmp3P28862 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Gm23251-201ENSMUST00000103773 110 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Gm7851-201ENSMUST00000117574 323 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gm9211-201ENSMUST00000182882 975 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Gm4482-201ENSMUST00000200876 742 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gm45118-201ENSMUST00000208928 825 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.12□□□□□ -0.31
Mmp3P28862 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.12□□□□□ -0.31
Mmp3P28862 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp3P28862 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Mmp3P28862 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.11□□□□□ -0.31
Mmp3P28862 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Mmp3P28862 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Gm12165-201ENSMUST00000117047 342 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.11□□□□□ -0.31
Mmp3P28862 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.11□□□□□ -0.31
Mmp3P28862 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Gm8956-201ENSMUST00000203939 825 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Ntng1-201ENSMUST00000051253 327 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Mmp3P28862 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.11□□□□□ -0.31
Mmp3P28862 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp3P28862 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Mmp3P28862 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp3P28862 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Mmp3P28862 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Gm13408-201ENSMUST00000119822 798 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Gm13935-201ENSMUST00000121859 798 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 Gm4034-201ENSMUST00000187674 480 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 Gm5733-201ENSMUST00000190232 939 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.1□□□□□ -0.31
Mmp3P28862 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Mmp3P28862 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.1□□□□□ -0.31
Mmp3P28862 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms