Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nckap1P28660 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.27□□□□□ -0.45
Nckap1P28660 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nckap1P28660 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nckap1P28660 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.27□□□□□ -0.45
Nckap1P28660 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nckap1P28660 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nckap1P28660 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Nckap1P28660 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Nckap1P28660 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nckap1P28660 Gm11331-201ENSMUST00000119764 288 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 Gm27552-201ENSMUST00000183351 62 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 Gm27844-201ENSMUST00000183613 62 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 Gm7003-201ENSMUST00000195089 312 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.26□□□□□ -0.45
Nckap1P28660 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nckap1P28660 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.26□□□□□ -0.45
Nckap1P28660 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nckap1P28660 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nckap1P28660 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nckap1P28660 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nckap1P28660 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm23949-201ENSMUST00000104027 127 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.25□□□□□ -0.45
Nckap1P28660 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.25□□□□□ -0.45
Nckap1P28660 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Nckap1P28660 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms