Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Col8a2P25318 B9d1os-201ENSMUST00000137010 674 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Mir5132-201ENSMUST00000175166 71 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Col8a2P25318 Gm28450-201ENSMUST00000187349 638 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Rprl1-202ENSMUST00000198476 238 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gm44958-201ENSMUST00000203734 736 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.25□□□□□ -0.77
Col8a2P25318 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gm8385-201ENSMUST00000058999 643 ntBASIC10.25□□□□□ -0.77
Col8a2P25318 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.25□□□□□ -0.77
Col8a2P25318 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Col8a2P25318 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.24□□□□□ -0.77
Col8a2P25318 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Col8a2P25318 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Gm13296-201ENSMUST00000117854 997 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Gm13665-201ENSMUST00000120830 528 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Col8a2P25318 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Col8a2P25318 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Col8a2P25318 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 Cog3-203ENSMUST00000227473 4197 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.24□□□□□ -0.77
Col8a2P25318 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Col8a2P25318 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Col8a2P25318 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms