Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc6P10629 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm15352-201ENSMUST00000118696 270 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm8737-201ENSMUST00000122208 642 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm23771-201ENSMUST00000178702 110 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.59□□□□□ -0.23
Hoxc6P10629 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm28686-201ENSMUST00000187404 609 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm2517-201ENSMUST00000215651 348 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm26035-201ENSMUST00000083065 308 ntBASIC13.59□□□□□ -0.23
Hoxc6P10629 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Hoxc6P10629 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc6P10629 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.58□□□□□ -0.23
Hoxc6P10629 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.58□□□□□ -0.23
Hoxc6P10629 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxc6P10629 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm23912-201ENSMUST00000104687 87 ntBASIC13.58□□□□□ -0.24
Hoxc6P10629 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm11451-201ENSMUST00000118946 630 ntBASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm11675-201ENSMUST00000121873 832 ntBASIC13.58□□□□□ -0.24
Hoxc6P10629 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.58□□□□□ -0.24
Hoxc6P10629 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.58□□□□□ -0.24
Hoxc6P10629 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.58□□□□□ -0.24
Hoxc6P10629 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.58□□□□□ -0.24
Hoxc6P10629 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxc6P10629 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hoxc6P10629 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxc6P10629 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxc6P10629 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxc6P10629 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.57□□□□□ -0.24
Hoxc6P10629 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms