Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.69□□□□□ -0.7
UbbP0CG49 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.69□□□□□ -0.7
UbbP0CG49 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm27437-201ENSMUST00000183429 107 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm18018-201ENSMUST00000198273 408 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.69□□□□□ -0.7
UbbP0CG49 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm44882-201ENSMUST00000205702 802 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
UbbP0CG49 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.69□□□□□ -0.7
UbbP0CG49 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
UbbP0CG49 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UbbP0CG49 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
UbbP0CG49 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.68□□□□□ -0.7
UbbP0CG49 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms