Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gm14193-201ENSMUST00000105067 153 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.48□□□□□ -0.57
Sod1P08228 Gm11628-201ENSMUST00000117568 171 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gm8737-201ENSMUST00000122208 642 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.48□□□□□ -0.57
Sod1P08228 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.48□□□□□ -0.57
Sod1P08228 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gm23771-201ENSMUST00000178702 110 ntBASIC11.48□□□□□ -0.57
Sod1P08228 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gm29499-201ENSMUST00000189151 486 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gm28329-201ENSMUST00000191208 689 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Gm29171-201ENSMUST00000191397 486 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sod1P08228 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sod1P08228 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.48□□□□□ -0.57
Sod1P08228 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sod1P08228 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.48□□□□□ -0.57
Sod1P08228 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sod1P08228 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm11949-201ENSMUST00000117640 372 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm15610-201ENSMUST00000120584 195 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.47□□□□□ -0.57
Sod1P08228 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.47□□□□□ -0.57
Sod1P08228 Gm37299-201ENSMUST00000193951 826 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm38117-201ENSMUST00000194653 939 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm43058-201ENSMUST00000197645 625 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm43186-201ENSMUST00000198130 824 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.47□□□□□ -0.57
Sod1P08228 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.47□□□□□ -0.57
Sod1P08228 Gm44980-201ENSMUST00000205826 314 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm17931-201ENSMUST00000208132 634 ntBASIC11.47□□□□□ -0.57
Sod1P08228 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sod1P08228 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sod1P08228 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.47□□□□□ -0.57
Sod1P08228 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sod1P08228 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms