Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P04224 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
P04224 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P04224 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.79□□□□□ -0.68
P04224 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.79□□□□□ -0.68
P04224 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
P04224 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P04224 BC043934-202ENSMUST00000185694 2356 ntBASIC10.79□□□□□ -0.68
P04224 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.79□□□□□ -0.68
P04224 Gm13689-201ENSMUST00000119360 685 ntBASIC10.79□□□□□ -0.68
P04224 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.79□□□□□ -0.68
P04224 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.79□□□□□ -0.68
P04224 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.79□□□□□ -0.68
P04224 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.79□□□□□ -0.68
P04224 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.79□□□□□ -0.68
P04224 Gm19184-201ENSMUST00000196798 928 ntBASIC10.79□□□□□ -0.68
P04224 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.79□□□□□ -0.68
P04224 Gm6458-201ENSMUST00000211573 635 ntBASIC10.79□□□□□ -0.68
P04224 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.79□□□□□ -0.68
P04224 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.79□□□□□ -0.68
P04224 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.79□□□□□ -0.68
P04224 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.79□□□□□ -0.68
P04224 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.79□□□□□ -0.68
P04224 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P04224 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
P04224 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04224 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.79□□□□□ -0.68
P04224 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.79□□□□□ -0.68
P04224 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04224 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
P04224 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.78□□□□□ -0.68
P04224 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.78□□□□□ -0.68
P04224 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04224 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Gm16202-201ENSMUST00000117532 544 ntBASIC10.78□□□□□ -0.68
P04224 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Gm15321-201ENSMUST00000121290 288 ntBASIC10.78□□□□□ -0.68
P04224 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.78□□□□□ -0.68
P04224 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
P04224 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.78□□□□□ -0.68
P04224 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.78□□□□□ -0.68
P04224 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.78□□□□□ -0.68
P04224 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.78□□□□□ -0.68
P04224 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P04224 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Syt7-204ENSMUST00000223586 1344 ntBASIC10.78□□□□□ -0.68
P04224 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.78□□□□□ -0.68
P04224 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04224 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04224 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04224 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms