Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col4a1P02463 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Gm29410-201ENSMUST00000188383 694 ntBASIC14.8□□□□□ -0.04
Col4a1P02463 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Gm19009-201ENSMUST00000223072 823 ntBASIC14.8□□□□□ -0.04
Col4a1P02463 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.8□□□□□ -0.04
Col4a1P02463 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col4a1P02463 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Gm15374-201ENSMUST00000119313 844 ntBASIC14.79□□□□□ -0.04
Col4a1P02463 Gm23218-201ENSMUST00000158124 276 ntBASIC14.79□□□□□ -0.04
Col4a1P02463 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.79□□□□□ -0.04
Col4a1P02463 Gm44315-201ENSMUST00000203041 219 ntBASIC14.79□□□□□ -0.04
Col4a1P02463 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.79□□□□□ -0.04
Col4a1P02463 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col4a1P02463 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a1P02463 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Mir6407-201ENSMUST00000184510 101 ntBASIC14.78□□□□□ -0.04
Col4a1P02463 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.78□□□□□ -0.04
Col4a1P02463 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm23105-201ENSMUST00000083719 134 ntBASIC14.78□□□□□ -0.04
Col4a1P02463 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col4a1P02463 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a1P02463 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.78□□□□□ -0.04
Col4a1P02463 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Col4a1P02463 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.77□□□□□ -0.04
Col4a1P02463 Gm13182-201ENSMUST00000122241 312 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Gm37981-201ENSMUST00000194280 535 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Col4a1P02463 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col4a1P02463 Gm9139-201ENSMUST00000218817 700 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Gm5451-201ENSMUST00000080545 579 ntBASIC14.77□□□□□ -0.04
Col4a1P02463 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Col4a1P02463 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
Col4a1P02463 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col4a1P02463 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a1P02463 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col4a1P02463 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Col4a1P02463 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Col4a1P02463 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms