Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1aO89116 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vti1aO89116 Gm11331-201ENSMUST00000119764 288 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm9083-201ENSMUST00000120423 819 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1aO89116 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.29□□□□□ -0.28
Vti1aO89116 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.29□□□□□ -0.28
Vti1aO89116 Gm8913-201ENSMUST00000209491 641 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vti1aO89116 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.29□□□□□ -0.28
Vti1aO89116 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vti1aO89116 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1aO89116 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1aO89116 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Vti1aO89116 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vti1aO89116 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm16296-201ENSMUST00000159905 325 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm28882-201ENSMUST00000185504 314 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.28□□□□□ -0.28
Vti1aO89116 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vti1aO89116 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.28□□□□□ -0.28
Vti1aO89116 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Vti1aO89116 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Vti1aO89116 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vti1aO89116 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Vti1aO89116 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1aO89116 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.27□□□□□ -0.28
Vti1aO89116 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1aO89116 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.27□□□□□ -0.28
Vti1aO89116 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.27□□□□□ -0.28
Vti1aO89116 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vti1aO89116 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Vti1aO89116 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm9630-201ENSMUST00000178304 885 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm8959-201ENSMUST00000213150 571 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vti1aO89116 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm10076-201ENSMUST00000073238 384 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms