Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CopeO89079 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.65□□□□□ -0.38
CopeO89079 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.65□□□□□ -0.38
CopeO89079 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.65□□□□□ -0.38
CopeO89079 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm11597-201ENSMUST00000121423 964 ntBASIC12.65□□□□□ -0.38
CopeO89079 Mir1894-201ENSMUST00000122802 81 ntBASIC12.65□□□□□ -0.38
CopeO89079 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CopeO89079 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm4271-201ENSMUST00000174444 973 ntBASIC12.65□□□□□ -0.38
CopeO89079 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CopeO89079 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm6244-201ENSMUST00000178732 841 ntBASIC12.65□□□□□ -0.38
CopeO89079 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.65□□□□□ -0.38
CopeO89079 Gm45384-201ENSMUST00000210451 277 ntBASIC12.65□□□□□ -0.38
CopeO89079 Gm29705-201ENSMUST00000212598 474 ntBASIC12.65□□□□□ -0.38
CopeO89079 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CopeO89079 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.65□□□□□ -0.38
CopeO89079 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.65□□□□□ -0.38
CopeO89079 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CopeO89079 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CopeO89079 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CopeO89079 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.65□□□□□ -0.38
CopeO89079 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.65□□□□□ -0.38
CopeO89079 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CopeO89079 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.64□□□□□ -0.39
CopeO89079 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.64□□□□□ -0.39
CopeO89079 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.64□□□□□ -0.39
CopeO89079 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Gm23984-201ENSMUST00000157139 203 ntBASIC12.64□□□□□ -0.39
CopeO89079 Gm22331-201ENSMUST00000158066 136 ntBASIC12.64□□□□□ -0.39
CopeO89079 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CopeO89079 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.64□□□□□ -0.39
CopeO89079 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.64□□□□□ -0.39
CopeO89079 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.64□□□□□ -0.39
CopeO89079 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.64□□□□□ -0.39
CopeO89079 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CopeO89079 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.64□□□□□ -0.39
CopeO89079 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CopeO89079 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms