Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.17□□□□□ -0.46
Pdlim1O70400 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.17□□□□□ -0.46
Pdlim1O70400 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.17□□□□□ -0.46
Pdlim1O70400 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.17□□□□□ -0.46
Pdlim1O70400 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.17□□□□□ -0.46
Pdlim1O70400 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim1O70400 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim1O70400 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm15276-201ENSMUST00000145953 498 ntBASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm6963-201ENSMUST00000147879 379 ntBASIC12.16□□□□□ -0.46
Pdlim1O70400 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm7584-201ENSMUST00000175829 940 ntBASIC12.16□□□□□ -0.46
Pdlim1O70400 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm19187-201ENSMUST00000206781 892 ntBASIC12.16□□□□□ -0.46
Pdlim1O70400 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim1O70400 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim1O70400 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim1O70400 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms