Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.12□□□□□ -0.15
Copb2O55029 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Copb2O55029 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Copb2O55029 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Copb2O55029 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.11□□□□□ -0.15
Copb2O55029 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Copb2O55029 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Copb2O55029 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.11□□□□□ -0.15
Copb2O55029 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.11□□□□□ -0.15
Copb2O55029 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.11□□□□□ -0.15
Copb2O55029 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.11□□□□□ -0.15
Copb2O55029 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Gm28071-201ENSMUST00000190355 478 ntBASIC14.11□□□□□ -0.15
Copb2O55029 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.11□□□□□ -0.15
Copb2O55029 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Copb2O55029 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Copb2O55029 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.11□□□□□ -0.15
Copb2O55029 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Copb2O55029 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Gm12266-201ENSMUST00000120311 962 ntBASIC14.1□□□□□ -0.15
Copb2O55029 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Gm20426-201ENSMUST00000173657 440 ntBASIC14.1□□□□□ -0.15
Copb2O55029 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Copb2O55029 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Gm43962-201ENSMUST00000203898 190 ntBASIC14.1□□□□□ -0.15
Copb2O55029 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.1□□□□□ -0.15
Copb2O55029 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Copb2O55029 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Copb2O55029 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Copb2O55029 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Copb2O55029 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.09□□□□□ -0.15
Copb2O55029 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Copb2O55029 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.09□□□□□ -0.15
Copb2O55029 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.09□□□□□ -0.15
Copb2O55029 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Copb2O55029 Gm7722-201ENSMUST00000120646 741 ntBASIC14.09□□□□□ -0.15
Copb2O55029 Gm12176-201ENSMUST00000121420 875 ntBASIC14.09□□□□□ -0.15
Copb2O55029 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.09□□□□□ -0.15
Copb2O55029 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.09□□□□□ -0.15
Copb2O55029 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms