Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.13□□□□□ -0.63
Rnf13O54965 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.13□□□□□ -0.63
Rnf13O54965 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.13□□□□□ -0.63
Rnf13O54965 Gm6745-201ENSMUST00000199216 526 ntBASIC11.13□□□□□ -0.63
Rnf13O54965 Gm4768-201ENSMUST00000206199 686 ntBASIC11.13□□□□□ -0.63
Rnf13O54965 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Gm19163-201ENSMUST00000223313 780 ntBASIC11.13□□□□□ -0.63
Rnf13O54965 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.13□□□□□ -0.63
Rnf13O54965 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf13O54965 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf13O54965 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.12□□□□□ -0.63
Rnf13O54965 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf13O54965 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf13O54965 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm12363-201ENSMUST00000122250 668 ntBASIC11.12□□□□□ -0.63
Rnf13O54965 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rnf13O54965 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf13O54965 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.12□□□□□ -0.63
Rnf13O54965 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf13O54965 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf13O54965 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf13O54965 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.11□□□□□ -0.63
Rnf13O54965 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf13O54965 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rnf13O54965 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf13O54965 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Rnf13O54965 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf13O54965 Mir1894-201ENSMUST00000122802 81 ntBASIC11.11□□□□□ -0.63
Rnf13O54965 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms