Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarce1O54941 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.58□□□□□ -0.08
Smarce1O54941 Gm29127-201ENSMUST00000188304 517 ntBASIC14.58□□□□□ -0.08
Smarce1O54941 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Smarce1O54941 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.58□□□□□ -0.08
Smarce1O54941 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.58□□□□□ -0.08
Smarce1O54941 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarce1O54941 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarce1O54941 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarce1O54941 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarce1O54941 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Smarce1O54941 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarce1O54941 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Smarce1O54941 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarce1O54941 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarce1O54941 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.57□□□□□ -0.08
Smarce1O54941 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gm8738-201ENSMUST00000172606 329 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.57□□□□□ -0.08
Smarce1O54941 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarce1O54941 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Gm5781-201ENSMUST00000219792 443 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gm10076-201ENSMUST00000073238 384 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarce1O54941 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.57□□□□□ -0.08
Smarce1O54941 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarce1O54941 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Smarce1O54941 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarce1O54941 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.56□□□□□ -0.08
Smarce1O54941 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarce1O54941 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarce1O54941 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.56□□□□□ -0.08
Smarce1O54941 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.56□□□□□ -0.08
Smarce1O54941 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smarce1O54941 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarce1O54941 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.55□□□□□ -0.08
Smarce1O54941 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarce1O54941 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarce1O54941 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarce1O54941 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarce1O54941 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarce1O54941 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smarce1O54941 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smarce1O54941 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Smarce1O54941 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarce1O54941 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarce1O54941 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms