Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.72□□□□□ -0.85
Efnb3O35393 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Efnb3O35393 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Efnb3O35393 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Efnb3O35393 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.71□□□□□ -0.85
Efnb3O35393 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Efnb3O35393 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Efnb3O35393 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Efnb3O35393 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Efnb3O35393 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Efnb3O35393 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.71□□□□□ -0.85
Efnb3O35393 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Efnb3O35393 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm12928-201ENSMUST00000117115 573 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Gm8805-201ENSMUST00000117848 313 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Gm11478-201ENSMUST00000117851 599 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Efnb3O35393 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Efnb3O35393 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.71□□□□□ -0.86
Efnb3O35393 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Efnb3O35393 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Efnb3O35393 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Efnb3O35393 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Gm13123-201ENSMUST00000122173 492 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm17208-201ENSMUST00000168388 535 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm44882-201ENSMUST00000205702 802 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm7653-201ENSMUST00000214567 508 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms