Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm12859-201ENSMUST00000117834 427 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm13612-201ENSMUST00000119276 390 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Rmrp-201ENSMUST00000157463 271 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm8810-201ENSMUST00000172895 754 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm44872-201ENSMUST00000207864 420 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shisa8J3QNX5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm15920-201ENSMUST00000118998 402 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm12363-201ENSMUST00000122250 668 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms