Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Rmrp-201ENSMUST00000157463 271 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm16296-201ENSMUST00000159905 325 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm27838-201ENSMUST00000184829 128 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm12887B1AVM1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Gm22121-201ENSMUST00000175148 54 ntBASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm12887B1AVM1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm12887B1AVM1 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm12887B1AVM1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms