Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm5291-201ENSMUST00000201965 899 ntBASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Chd6A3KFM7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm8019-201ENSMUST00000119317 587 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm12274-201ENSMUST00000120062 385 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm12579-201ENSMUST00000118040 783 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm6612-201ENSMUST00000170777 395 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Krtap6-3-201ENSMUST00000079151 444 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.87□□□□□ -0.83
Chd6A3KFM7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Chd6A3KFM7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm23745-201ENSMUST00000104230 125 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm12291-201ENSMUST00000121627 311 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm9797-202ENSMUST00000218003 294 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms