Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm17415-201ENSMUST00000096427 789 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm5668-201ENSMUST00000220897 436 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm10291-201ENSMUST00000094175 999 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 AC173482.6-201ENSMUST00000225889 1741 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm26976-201ENSMUST00000182929 908 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Gm5738-201ENSMUST00000206016 779 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ubr4A2AN08 AC118639.1-202ENSMUST00000226957 653 ntBASIC6.29□□□□□ -1.4
Ubr4A2AN08 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ubr4A2AN08 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm11244-201ENSMUST00000121243 237 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm37009-201ENSMUST00000193297 361 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm5308-201ENSMUST00000196752 1354 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm18642-201ENSMUST00000206642 1400 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 AC163638.2-201ENSMUST00000224920 827 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Prss23os-202ENSMUST00000179361 1362 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm18001-201ENSMUST00000212023 688 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Mir675-201ENSMUST00000102320 84 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm13422-201ENSMUST00000118834 504 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm9630-201ENSMUST00000178304 885 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC6.28□□□□□ -1.4
Ubr4A2AN08 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ubr4A2AN08 Smok4a-201ENSMUST00000074512 1455 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms