Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm12036-201ENSMUST00000120008 530 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm13315-201ENSMUST00000120376 991 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm4271-201ENSMUST00000174444 973 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm45930-201ENSMUST00000221330 292 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav12d-1A0N8R0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm12314-201ENSMUST00000118104 538 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm44958-201ENSMUST00000203734 736 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav12d-1A0N8R0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms