Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm24694-201ENSMUST00000180054 110 ntBASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm27663-201ENSMUST00000184839 110 ntBASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm19220-201ENSMUST00000222682 803 ntBASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm8227-201ENSMUST00000223306 571 ntBASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms