Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Snora78-201ENSMUST00000158630 128 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm18062-201ENSMUST00000208020 547 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm18055-201ENSMUST00000208254 547 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC166349.1-201ENSMUST00000220866 695 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm45930-201ENSMUST00000221330 292 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC125209.1-201ENSMUST00000225812 766 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm45342-201ENSMUST00000210903 1363 ntBASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm36970-201ENSMUST00000193688 1859 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm22018-201ENSMUST00000104357 131 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm13736-201ENSMUST00000119272 253 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm27514-201ENSMUST00000183692 110 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm9728-201ENSMUST00000200197 1055 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm45880-201ENSMUST00000213041 853 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 AC154462.2-201ENSMUST00000227519 370 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm25857-201ENSMUST00000082788 129 ntBASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav9n-2A0A0G2JDP3 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms