Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcb1Q9Z0H3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcb1Q9Z0H3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcb1Q9Z0H3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 170.4 ms