Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Smco4Q9JIS3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm2810-201ENSMUST00000118681 990 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm18165-201ENSMUST00000217426 928 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Smco4Q9JIS3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm13385-201ENSMUST00000121089 220 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm25948-201ENSMUST00000175334 112 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms