Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm11439-201ENSMUST00000118598 409 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm8420-201ENSMUST00000097103 598 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.54□□□□□ -0.56
Hmgn3Q9DCB1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Gm28693-202ENSMUST00000190758 331 ntBASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmgn3Q9DCB1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.52□□□□□ -0.56
Hmgn3Q9DCB1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gm22189-201ENSMUST00000103822 86 ntBASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gm15321-201ENSMUST00000121290 288 ntBASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms