Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc7Q9D541 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Mir1247-201ENSMUST00000116706 82 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.35□□□□□ -0.11
Ccdc7Q9D541 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc7Q9D541 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm24845-201ENSMUST00000158034 109 ntBASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm25043-201ENSMUST00000158604 212 ntBASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm9136-201ENSMUST00000193368 454 ntBASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gm18711-201ENSMUST00000199341 750 ntBASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7Q9D541 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms