Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm10312-201ENSMUST00000078515 489 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm22042-201ENSMUST00000082989 165 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm26232-201ENSMUST00000083360 166 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm24136-201ENSMUST00000083374 165 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm26110-201ENSMUST00000083971 165 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ssbp3Q9D032 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Gm28882-201ENSMUST00000185504 314 ntBASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.28□□□□□ -0.76
Ssbp3Q9D032 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ssbp3Q9D032 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Gm13665-201ENSMUST00000120830 528 ntBASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ssbp3Q9D032 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.27□□□□□ -0.77
Ssbp3Q9D032 Gm38317-201ENSMUST00000195564 343 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms