Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ddx28Q9CWT6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm8805-201ENSMUST00000117848 313 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm13813-201ENSMUST00000120998 787 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.57□□□□□ -0.56
Ddx28Q9CWT6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ddx28Q9CWT6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms