Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Mir483-201ENSMUST00000093631 73 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldnd1Q9CQX5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm8731-201ENSMUST00000118088 412 ntBASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldnd1Q9CQX5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm12579-201ENSMUST00000118040 783 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm11836-201ENSMUST00000121022 441 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm21092-201ENSMUST00000178995 955 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Acot6-202ENSMUST00000222921 3622 ntBASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms