Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm8805-201ENSMUST00000117848 313 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm37497-201ENSMUST00000195830 798 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm9794-201ENSMUST00000202370 423 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ska1Q9CPV1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm11803-201ENSMUST00000119966 444 ntBASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm24196-201ENSMUST00000179161 110 ntBASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ska1Q9CPV1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.64□□□□□ -0.55
Ska1Q9CPV1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms