Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm16296-201ENSMUST00000159905 325 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm17208-201ENSMUST00000168388 535 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm28631-201ENSMUST00000190740 334 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm6218-201ENSMUST00000219812 628 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt88Q9CPR6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Krt88Q9CPR6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Krt88Q9CPR6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm26185-201ENSMUST00000157692 266 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt88Q9CPR6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms