Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm8285-201ENSMUST00000208293 759 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Gm45925-201ENSMUST00000218882 744 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Ntng1-201ENSMUST00000051253 327 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Scrt1Q99M85 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.83□□□□□ -0.68
Scrt1Q99M85 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scrt1Q99M85 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm6963-201ENSMUST00000147879 379 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm24845-201ENSMUST00000158034 109 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm18734-201ENSMUST00000172937 808 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm44551-201ENSMUST00000208804 171 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scrt1Q99M85 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm23363-201ENSMUST00000175024 79 ntBASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.81□□□□□ -0.68
Scrt1Q99M85 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms