Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gm18307-201ENSMUST00000206864 949 ntBASIC12.41□□□□□ -0.42
Cdk9Q99J95 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.4□□□□□ -0.42
Cdk9Q99J95 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.4□□□□□ -0.42
Cdk9Q99J95 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Mir7654-201ENSMUST00000185082 70 ntBASIC12.4□□□□□ -0.42
Cdk9Q99J95 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Gm28693-202ENSMUST00000190758 331 ntBASIC12.4□□□□□ -0.42
Cdk9Q99J95 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk9Q99J95 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdk9Q99J95 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdk9Q99J95 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdk9Q99J95 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm14921-201ENSMUST00000118643 908 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm11918-201ENSMUST00000121660 179 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm12138-201ENSMUST00000122180 951 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm45384-201ENSMUST00000210451 277 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.39□□□□□ -0.43
Cdk9Q99J95 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk9Q99J95 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms