Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm38378-201ENSMUST00000195153 2268 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clip1Q922J3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Gm12579-201ENSMUST00000118040 783 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Clip1Q922J3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Gm9463-201ENSMUST00000206707 601 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 AC098716.1-201ENSMUST00000213527 703 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 AC122408.1-201ENSMUST00000218949 218 ntBASIC19.15■□□□□ 0.66
Clip1Q922J3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clip1Q922J3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clip1Q922J3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip1Q922J3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip1Q922J3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Clip1Q922J3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC19.14■□□□□ 0.66
Clip1Q922J3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip1Q922J3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clip1Q922J3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC19.14■□□□□ 0.65
Clip1Q922J3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC19.14■□□□□ 0.65
Clip1Q922J3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC19.14■□□□□ 0.65
Clip1Q922J3 Gm4034-201ENSMUST00000187674 480 ntBASIC19.14■□□□□ 0.65
Clip1Q922J3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clip1Q922J3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Clip1Q922J3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clip1Q922J3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Clip1Q922J3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Gm43570-201ENSMUST00000199951 3688 ntBASIC19.13■□□□□ 0.65
Clip1Q922J3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Gm4310-201ENSMUST00000177847 889 ntBASIC19.13■□□□□ 0.65
Clip1Q922J3 Gm5714-201ENSMUST00000197343 566 ntBASIC19.13■□□□□ 0.65
Clip1Q922J3 CT009713.8-202ENSMUST00000224732 385 ntBASIC19.13■□□□□ 0.65
Clip1Q922J3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC19.13■□□□□ 0.65
Clip1Q922J3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clip1Q922J3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm14314-201ENSMUST00000118225 1015 ntBASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm13888-201ENSMUST00000119148 422 ntBASIC19.12■□□□□ 0.65
Clip1Q922J3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm8815-201ENSMUST00000173809 620 ntBASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC19.12■□□□□ 0.65
Clip1Q922J3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms