Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm11222-201ENSMUST00000119005 738 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm7399-201ENSMUST00000032395 858 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm9996-201ENSMUST00000070359 913 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb6Q91XZ4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Rprl1-201ENSMUST00000158050 327 ntBASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Gm6621-201ENSMUST00000193251 772 ntBASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Gm30285-201ENSMUST00000214614 422 ntBASIC12.61□□□□□ -0.39
Pcdhb6Q91XZ4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms