Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm38671-201ENSMUST00000200573 130 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh18Q8VHR0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh18Q8VHR0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh18Q8VHR0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh18Q8VHR0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Mir686-201ENSMUST00000102174 109 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm8515-201ENSMUST00000194852 576 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms