Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkd2Q8VE28 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm24830-201ENSMUST00000102024 166 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm25890-201ENSMUST00000177643 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm22614-201ENSMUST00000178300 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm30285-201ENSMUST00000214614 422 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm22042-201ENSMUST00000082989 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm26232-201ENSMUST00000083360 166 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm24136-201ENSMUST00000083374 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm26110-201ENSMUST00000083971 165 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkd2Q8VE28 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm14017-201ENSMUST00000121934 386 ntBASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkd2Q8VE28 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms