Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm27516-201ENSMUST00000184237 98 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm38266-201ENSMUST00000194931 421 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfwd3Q8CIK8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm11222-201ENSMUST00000119005 738 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm27023-201ENSMUST00000182372 285 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm37201-201ENSMUST00000191845 523 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm6621-201ENSMUST00000193251 772 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm5950-201ENSMUST00000213337 772 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rfwd3Q8CIK8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rfwd3Q8CIK8 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Rfwd3Q8CIK8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rfwd3Q8CIK8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rfwd3Q8CIK8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.58□□□□□ -0.56
Rfwd3Q8CIK8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rfwd3Q8CIK8 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms