Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm8805-201ENSMUST00000117848 313 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28bQ8CEG5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm13123-201ENSMUST00000122173 492 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm6218-201ENSMUST00000219812 628 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28bQ8CEG5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms