Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lysmd4Q8CC84 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm8810-201ENSMUST00000172895 754 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm28911-201ENSMUST00000188837 117 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm18304-201ENSMUST00000189162 546 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.02□□□□□ -0.65
Lysmd4Q8CC84 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm12203-201ENSMUST00000118235 598 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm13369-201ENSMUST00000119442 987 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm12209-201ENSMUST00000120089 596 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm9083-201ENSMUST00000120423 819 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm10146-201ENSMUST00000072739 309 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lysmd4Q8CC84 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms