Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm23912-201ENSMUST00000104687 87 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim9Q8C7M3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm12241-201ENSMUST00000118330 726 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms