Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Gm27320-201ENSMUST00000184892 109 ntBASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gm12015-201ENSMUST00000117065 843 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gm5070-201ENSMUST00000177599 862 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gzmn-202ENSMUST00000225535 989 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Cog3-203ENSMUST00000227473 4197 ntBASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc60Q8C4J0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 AA914427-201ENSMUST00000193194 1166 ntBASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm6082-201ENSMUST00000215204 454 ntBASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc60Q8C4J0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms