Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.6□□□□□ -0.55
Ska3Q8C263 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm23119-201ENSMUST00000158610 140 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm43438-201ENSMUST00000198133 379 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm44958-201ENSMUST00000203734 736 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm30285-201ENSMUST00000214614 422 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Cts7-204ENSMUST00000225321 1257 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ska3Q8C263 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.6□□□□□ -0.55
Ska3Q8C263 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ska3Q8C263 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska3Q8C263 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm25214-201ENSMUST00000104573 129 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Ska3Q8C263 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm44364-201ENSMUST00000198368 141 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm6334-201ENSMUST00000207083 228 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm45865-201ENSMUST00000211815 945 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ska3Q8C263 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.59□□□□□ -0.55
Ska3Q8C263 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska3Q8C263 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms