Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm24679-201ENSMUST00000158762 111 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm4862-201ENSMUST00000170405 438 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Mir8093-201ENSMUST00000185043 137 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cps1Q8C196 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC16.24■□□□□ 0.19
Cps1Q8C196 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm9884-201ENSMUST00000194343 1222 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm25053-202ENSMUST00000199731 132 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm30671-201ENSMUST00000214898 318 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cps1Q8C196 AC140375.1-201ENSMUST00000225421 694 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC16.24■□□□□ 0.19
Cps1Q8C196 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cps1Q8C196 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Cps1Q8C196 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cps1Q8C196 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Mir671-201ENSMUST00000102432 98 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm14807-201ENSMUST00000116640 983 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm13549-201ENSMUST00000118339 796 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm15172-201ENSMUST00000118945 1046 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.23■□□□□ 0.19
Cps1Q8C196 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Cps1Q8C196 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cps1Q8C196 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm14395-201ENSMUST00000120494 563 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm8197-202ENSMUST00000193422 934 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm5298-201ENSMUST00000201122 892 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 AC134869.4-202ENSMUST00000224350 837 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 AC164437.3-201ENSMUST00000228323 347 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm4604-201ENSMUST00000025040 390 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm10263-201ENSMUST00000085163 300 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Gm18294-201ENSMUST00000176980 1748 ntBASIC16.22■□□□□ 0.19
Cps1Q8C196 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cps1Q8C196 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cps1Q8C196 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cps1Q8C196 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cps1Q8C196 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cps1Q8C196 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cps1Q8C196 Gm12218-201ENSMUST00000117666 399 ntBASIC16.21■□□□□ 0.19
Cps1Q8C196 Gm13117-201ENSMUST00000120894 691 ntBASIC16.21■□□□□ 0.19
Cps1Q8C196 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC16.21■□□□□ 0.19
Cps1Q8C196 Gm18201-201ENSMUST00000174735 875 ntBASIC16.21■□□□□ 0.19
Cps1Q8C196 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 967 ms