Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim47Q8C0E3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm14017-201ENSMUST00000121934 386 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim47Q8C0E3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm14208-201ENSMUST00000119645 678 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm2260-201ENSMUST00000184965 657 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim47Q8C0E3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim47Q8C0E3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim47Q8C0E3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Gm12813-201ENSMUST00000119615 902 ntBASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim47Q8C0E3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms